HL_3J29_028
3D structure
- PDB id
- 3J29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 14 Å
Loop
- Sequence
- CGCGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J29_028 not in the Motif Atlas
- Geometric match to HL_6AZ4_001
- Geometric discrepancy: 0.1882
- The information below is about HL_6AZ4_001
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
3J29|1|N|C|1265
3J29|1|N|G|1266
3J29|1|N|C|1267
3J29|1|N|G|1268
3J29|1|N|A|1269
3J29|1|N|G|1270
Current chains
- Chain N
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: