HL_3J45_007

3D structure

PDB id

3J45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a non-translocating SecY protein channel with the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

3J45|1|5|C|2145, 3J45|1|5|C|2146, 3J45|1|5|A|2147

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J45_007 not in the Motif Atlas

Geometric match to HL_8CRE_038

Geometric discrepancy: 0.3508

The information below is about HL_8CRE_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

3J45|1|5|C|2143
3J45|1|5|G|2144
3J45|1|5|C|2145
3J45|1|5|C|2146
3J45|1|5|A|2147
3J45|1|5|G|2148

Current chains

Chain 5

23S ribosomal RNA

Nearby chains