HL_3J5L_076
3D structure
- PDB id
- 3J5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli 50S subunit with ErmBL nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.6 Å
Loop
- Sequence
- GUCGGACAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J5L_076 not in the Motif Atlas
- Homologous match to HL_5J7L_219
- Geometric discrepancy: 0.2034
- The information below is about HL_5J7L_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50860.2
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3J5L|1|A|G|2304
3J5L|1|A|U|2305
3J5L|1|A|C|2306
3J5L|1|A|G|2307
3J5L|1|A|G|2308
3J5L|1|A|A|2309
3J5L|1|A|C|2310
3J5L|1|A|A|2311
3J5L|1|A|U|2312
Current chains
- Chain A
- 23S ribsomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L5
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