HL_3J6B_014

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAUAAAC

Length

8 nucleotides

Bulged bases

3J6B|1|A|A|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J6B_014 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1221

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

3J6B|1|A|G|612
3J6B|1|A|G|613
3J6B|1|A|A|614
3J6B|1|A|U|615
3J6B|1|A|A|616
3J6B|1|A|A|617
3J6B|1|A|A|618
3J6B|1|A|C|619

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial