HL_3J6B_021

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAU

Length

4 nucleotides

Bulged bases

3J6B|1|A|A|1077

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J6B_021 not in the Motif Atlas

Geometric match to HL_6JOO_002

Geometric discrepancy: 0.3549

The information below is about HL_6JOO_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

3J6B|1|A|A|1075
3J6B|1|A|U|1076
3J6B|1|A|A|1077
3J6B|1|A|U|1078

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain c

54S ribosomal protein L31, mitochondrial