HL_3J6B_035

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAUUAUGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J6B_035 not in the Motif Atlas

Homologous match to HL_9DFE_046

Geometric discrepancy: 0.377

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82185.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

3J6B|1|A|U|1811
3J6B|1|A|U|1812
3J6B|1|A|A|1813
3J6B|1|A|U|1814
3J6B|1|A|U|1815
3J6B|1|A|A|1816
3J6B|1|A|U|1817
3J6B|1|A|G|1818
3J6B|1|A|A|1819
3J6B|1|A|G|1820

Current chains

Chain A

21S ribosomal RNA

Nearby chains