HL_3J6B_050
3D structure
- PDB id
- 3J6B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAUUGUAAA
- Length
- 10 nucleotides
- Bulged bases
- 3J6B|1|A|A|2673
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J6B_050 not in the Motif Atlas
- Homologous match to HL_5J7L_192
- Geometric discrepancy: 0.1571
- The information below is about HL_5J7L_192
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53454.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3J6B|1|A|U|2671
3J6B|1|A|G|2672
3J6B|1|A|A|2673
3J6B|1|A|U|2674
3J6B|1|A|U|2675
3J6B|1|A|G|2676
3J6B|1|A|U|2677
3J6B|1|A|A|2678
3J6B|1|A|A|2679
3J6B|1|A|A|2680
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain J
- 54S ribosomal protein L10, mitochondrial
- Chain b
- 54S ribosomal protein L25, mitochondrial
Coloring options: