HL_3J72_005
3D structure
- PDB id
- 3J72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCUGAUCGA
- Length
- 10 nucleotides
- Bulged bases
- 3J72|1|5|C|210
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J72_005 not in the Motif Atlas
- Geometric match to HL_4V88_219
- Geometric discrepancy: 0.3245
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3J72|1|5|U|203
3J72|1|5|U|204
3J72|1|5|C|205
3J72|1|5|U|206
3J72|1|5|G|207
3J72|1|5|A|208
3J72|1|5|U|209
3J72|1|5|C|210
3J72|1|5|G|211
3J72|1|5|A|212
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain Y
- Ribosomal protein uL24
- Chain e
- Ribosomal protein eL32
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