HL_3J72_081
3D structure
- PDB id
- 3J72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- 3J72|1|5|U|4302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J72_081 not in the Motif Atlas
- Geometric match to HL_8CRE_057
- Geometric discrepancy: 0.2199
- The information below is about HL_8CRE_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80599.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
3J72|1|5|U|4301
3J72|1|5|U|4302
3J72|1|5|C|4303
3J72|1|5|A|4304
3J72|1|5|G|4305
3J72|1|5|U|4306
3J72|1|5|A|4307
3J72|1|5|C|4308
3J72|1|5|G|4309
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain Q
- Ribosomal protein eL18
- Chain T
- Ribosomal protein eL21
- Chain a
- Ribosomal protein uL15
- Chain o
- Ribosomal protein eL42
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