HL_3J73_025

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUUGGUAAGCAGA

Length

13 nucleotides

Bulged bases

3J73|1|5|G|1869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|U|1861
3J73|1|5|U|1862
3J73|1|5|U|1863
3J73|1|5|G|1864
3J73|1|5|G|1865
3J73|1|5|U|1866
3J73|1|5|A|1867
3J73|1|5|A|1868
3J73|1|5|G|1869
3J73|1|5|C|1870
3J73|1|5|A|1871
3J73|1|5|G|1872
3J73|1|5|A|1873

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 7

5S ribosomal RNA

Chain I

Ribosomal protein uL16

Chain S5

A/P tRNA

Chain b

Ribosomal protein eL29