HL_3J73_035

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGUUCAGAUCCC

Length

12 nucleotides

Bulged bases

3J73|1|5|U|2530, 3J73|1|5|C|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|G|2522
3J73|1|5|G|2523
3J73|1|5|U|2524
3J73|1|5|U|2525
3J73|1|5|C|2526
3J73|1|5|A|2527
3J73|1|5|G|2528
3J73|1|5|A|2529
3J73|1|5|U|2530
3J73|1|5|C|2531
3J73|1|5|C|2532
3J73|1|5|C|2533

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 1

Sec61 alpha subunit

Chain R

Ribosomal protein eL19

Chain X

Ribosomal protein uL23

Chain g

Ribosomal protein eL34