HL_3J73_050

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCAAAUGCCUCGUCAUCUAAUUAGUGACGCG

Length

31 nucleotides

Bulged bases

3J73|1|5|A|3785, 3J73|1|5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|C|3781
3J73|1|5|C|3782
3J73|1|5|A|3783
3J73|1|5|A|3784
3J73|1|5|A|3785
3J73|1|5|U|3786
3J73|1|5|G|3787
3J73|1|5|C|3788
3J73|1|5|C|3789
3J73|1|5|U|3790
3J73|1|5|C|3791
3J73|1|5|G|3792
3J73|1|5|U|3793
3J73|1|5|C|3794
3J73|1|5|A|3795
3J73|1|5|U|3796
3J73|1|5|C|3797
3J73|1|5|U|3798
3J73|1|5|A|3799
3J73|1|5|A|3800
3J73|1|5|U|3801
3J73|1|5|U|3802
3J73|1|5|A|3803
3J73|1|5|G|3804
3J73|1|5|U|3805
3J73|1|5|G|3806
3J73|1|5|A|3807
3J73|1|5|C|3808
3J73|1|5|G|3809
3J73|1|5|C|3810
3J73|1|5|G|3811

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S2

18S ribosomal RNA

Chain S5

A/P tRNA

Chain V

Ribosomal protein uL14

Chain n

Ribosomal protein eL41