HL_3J73_060

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCAAGCGUUCAUAGCGACG

Length

19 nucleotides

Bulged bases

3J73|1|5|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|C|4412
3J73|1|5|C|4413
3J73|1|5|A|4414
3J73|1|5|A|4415
3J73|1|5|G|4416
3J73|1|5|C|4417
3J73|1|5|G|4418
3J73|1|5|U|4419
3J73|1|5|U|4420
3J73|1|5|C|4421
3J73|1|5|A|4422
3J73|1|5|U|4423
3J73|1|5|A|4424
3J73|1|5|G|4425
3J73|1|5|C|4426
3J73|1|5|G|4427
3J73|1|5|A|4428
3J73|1|5|C|4429
3J73|1|5|G|4430

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein uL16

Chain m

Ribosomal protein eL40