HL_3J73_066

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGACUGAACGCCUCUAAGUCA

Length

21 nucleotides

Bulged bases

3J73|1|5|G|4694

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|5|U|4685
3J73|1|5|G|4686
3J73|1|5|A|4687
3J73|1|5|C|4688
3J73|1|5|U|4689
3J73|1|5|G|4690
3J73|1|5|A|4691
3J73|1|5|A|4692
3J73|1|5|C|4693
3J73|1|5|G|4694
3J73|1|5|C|4695
3J73|1|5|C|4696
3J73|1|5|U|4697
3J73|1|5|C|4698
3J73|1|5|U|4699
3J73|1|5|A|4700
3J73|1|5|A|4701
3J73|1|5|G|4702
3J73|1|5|U|4703
3J73|1|5|C|4704
3J73|1|5|A|4705

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

Ribosomal protein uL6

Chain O

Ribosomal protein uL13

Chain m

Ribosomal protein eL40