HL_3J73_088

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCCACUUUAAAUCCUUCCG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|U|566
3J73|1|S2|C|567
3J73|1|S2|C|568
3J73|1|S2|A|569
3J73|1|S2|C|570
3J73|1|S2|U|571
3J73|1|S2|U|572
3J73|1|S2|U|573
3J73|1|S2|A|574
3J73|1|S2|A|575
3J73|1|S2|A|576
3J73|1|S2|U|577
3J73|1|S2|C|578
3J73|1|S2|C|579
3J73|1|S2|U|580
3J73|1|S2|U|581
3J73|1|S2|C|582
3J73|1|S2|C|583
3J73|1|S2|G|584

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

Ribosomal protein uS4

Chain SY

Ribosomal protein eS24