HL_3J73_091

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUCUCGGCGGGGCCCGAAG*G

Length

21 nucleotides

Bulged bases

3J73|1|S2|C|748

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|C|745
3J73|1|S2|C|746
3J73|1|S2|U|747
3J73|1|S2|C|748
3J73|1|S2|U|749
3J73|1|S2|C|750
3J73|1|S2|G|751
3J73|1|S2|G|752
3J73|1|S2|C|753
3J73|1|S2|G|786
3J73|1|S2|G|787
3J73|1|S2|G|788
3J73|1|S2|G|789
3J73|1|S2|C|790
3J73|1|S2|C|791
3J73|1|S2|C|792
3J73|1|S2|G|793
3J73|1|S2|A|794
3J73|1|S2|A|795
3J73|1|S2|G|796
*
3J73|1|S2|G|796

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

Ribosomal protein eS4

Chain SG

Ribosomal protein eS6

Chain SH

Ribosomal protein eS7

Chain SL

Ribosomal protein uS17