HL_3J73_101

3D structure

PDB id

3J73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGGUUAAUUCCG

Length

13 nucleotides

Bulged bases

3J73|1|S2|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J73|1|S2|C|1363
3J73|1|S2|U|1364
3J73|1|S2|G|1365
3J73|1|S2|G|1366
3J73|1|S2|U|1367
3J73|1|S2|U|1368
3J73|1|S2|A|1369
3J73|1|S2|A|1370
3J73|1|S2|U|1371
3J73|1|S2|U|1372
3J73|1|S2|C|1373
3J73|1|S2|C|1374
3J73|1|S2|G|1375

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SR

Ribosomal protein eS17

Chain Sa

Ribosomal protein eS26