HL_3J74_011
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGAAGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J74_011 not in the Motif Atlas
- Geometric match to HL_6UFH_005
- Geometric discrepancy: 0.2262
- The information below is about HL_6UFH_005
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 428
Unit IDs
3J74|1|5|U|393
3J74|1|5|G|394
3J74|1|5|A|395
3J74|1|5|A|396
3J74|1|5|G|397
3J74|1|5|A|398
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain P
- Ribosomal protein uL22
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