HL_3J74_028
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J74_028 not in the Motif Atlas
- Geometric match to HL_3HHN_010
- Geometric discrepancy: 0.3236
- The information below is about HL_3HHN_010
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
3J74|1|5|U|2006
3J74|1|5|G|2007
3J74|1|5|U|2008
3J74|1|5|A|2009
3J74|1|5|A|2010
3J74|1|5|C|2011
3J74|1|5|A|2012
3J74|1|5|A|2013
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 4
- Eukaryotic elongation factor 2
- Chain K
- Ribosomal protein uL11
- Chain m
- Ribosomal protein eL40
- Chain q
- Ribosomal protein uL10
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