3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UGACUGAACGCCUCUAAGUCA
Length
21 nucleotides
Bulged bases
3J74|1|5|G|4694
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|5|U|4685
3J74|1|5|G|4686
3J74|1|5|A|4687
3J74|1|5|C|4688
3J74|1|5|U|4689
3J74|1|5|G|4690
3J74|1|5|A|4691
3J74|1|5|A|4692
3J74|1|5|C|4693
3J74|1|5|G|4694
3J74|1|5|C|4695
3J74|1|5|C|4696
3J74|1|5|U|4697
3J74|1|5|C|4698
3J74|1|5|U|4699
3J74|1|5|A|4700
3J74|1|5|A|4701
3J74|1|5|G|4702
3J74|1|5|U|4703
3J74|1|5|C|4704
3J74|1|5|A|4705

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain H
Ribosomal protein uL6
Chain O
Ribosomal protein uL13
Chain m
Ribosomal protein eL40

Coloring options:

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