HL_3J74_084

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAUCAGGGUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J74|1|S2|G|413
3J74|1|S2|A|414
3J74|1|S2|A|415
3J74|1|S2|U|416
3J74|1|S2|C|417
3J74|1|S2|A|418
3J74|1|S2|G|419
3J74|1|S2|G|420
3J74|1|S2|G|421
3J74|1|S2|U|422
3J74|1|S2|U|423
3J74|1|S2|C|424

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SC

Ribosomal protein uS5

Chain SJ

Ribosomal protein uS4

Chain SL

Ribosomal protein uS17

Chain SW

Ribosomal protein uS8

Chain SX

Ribosomal protein uS12