3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UCCACUUUAAAUCCUUCCG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|S2|U|566
3J74|1|S2|C|567
3J74|1|S2|C|568
3J74|1|S2|A|569
3J74|1|S2|C|570
3J74|1|S2|U|571
3J74|1|S2|U|572
3J74|1|S2|U|573
3J74|1|S2|A|574
3J74|1|S2|A|575
3J74|1|S2|A|576
3J74|1|S2|U|577
3J74|1|S2|C|578
3J74|1|S2|C|579
3J74|1|S2|U|580
3J74|1|S2|U|581
3J74|1|S2|C|582
3J74|1|S2|C|583
3J74|1|S2|G|584

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SJ
Ribosomal protein uS4
Chain SY
Ribosomal protein eS24

Coloring options:

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