3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CCUCUCGGCGGGGCCCGAAG*G
Length
21 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|S2|C|745
3J74|1|S2|C|746
3J74|1|S2|U|747
3J74|1|S2|C|748
3J74|1|S2|U|749
3J74|1|S2|C|750
3J74|1|S2|G|751
3J74|1|S2|G|752
3J74|1|S2|C|753
3J74|1|S2|G|786
3J74|1|S2|G|787
3J74|1|S2|G|788
3J74|1|S2|G|789
3J74|1|S2|C|790
3J74|1|S2|C|791
3J74|1|S2|C|792
3J74|1|S2|G|793
3J74|1|S2|A|794
3J74|1|S2|A|795
3J74|1|S2|G|796
*
3J74|1|S2|G|796

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SE
Ribosomal protein eS4
Chain SG
Ribosomal protein eS6
Chain SH
Ribosomal protein eS7
Chain SL
Ribosomal protein uS17

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.2787 s