3D structure

PDB id
3J77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
Experimental method
ELECTRON MICROSCOPY
Resolution
6.2 Å

Loop

Sequence
GGGCCCAUUCGGGUCU
Length
16 nucleotides
Bulged bases
3J77|1|1S|U|493, 3J77|1|1S|U|494, 3J77|1|1S|C|495
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J77|1|1S|G|486
3J77|1|1S|G|487
3J77|1|1S|G|488
3J77|1|1S|C|489
3J77|1|1S|C|490
3J77|1|1S|C|491
3J77|1|1S|A|492
3J77|1|1S|U|493
3J77|1|1S|U|494
3J77|1|1S|C|495
3J77|1|1S|G|496
3J77|1|1S|G|497
3J77|1|1S|G|498
3J77|1|1S|U|499
3J77|1|1S|C|500
3J77|1|1S|U|501

Current chains

Chain 1S
18S ribosomal RNA

Nearby chains

Chain 30
40S ribosomal protein S30

Coloring options:

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