HL_3J77_089

3D structure

PDB id

3J77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J77|1|2S|G|2534
3J77|1|2S|A|2535
3J77|1|2S|A|2536
3J77|1|2S|U|2537
3J77|1|2S|U|2538
3J77|1|2S|C|2539
3J77|1|2S|A|2540
3J77|1|2S|U|2541
3J77|1|2S|U|2542
3J77|1|2S|U|2543
3J77|1|2S|U|2544
3J77|1|2S|C|2545

Current chains

Chain 2S

25S ribosomal RNA

Nearby chains

Chain 84

60S ribosomal protein L34

Chain L8

60S ribosomal protein L8

Chain S1

40S ribosomal protein S1