HL_3J77_095

3D structure

PDB id

3J77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

UUUCAGUGUGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J77|1|2S|U|2723
3J77|1|2S|U|2724
3J77|1|2S|U|2725
3J77|1|2S|C|2726
3J77|1|2S|A|2727
3J77|1|2S|G|2728
3J77|1|2S|U|2729
3J77|1|2S|G|2730
3J77|1|2S|U|2731
3J77|1|2S|G|2732
3J77|1|2S|A|2733

Current chains

Chain 2S

25S ribosomal RNA

Nearby chains

Chain 68

60S ribosomal protein L18

Chain 71

60S ribosomal protein L21

Chain 78

60S ribosomal protein L28

Chain 79

60S ribosomal protein L29

Chain 92

60S ribosomal protein L42