HL_3J78_036

3D structure

PDB id

3J78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.3 Å

Loop

Sequence

UUAGAGAAGGGGGCAACUCCAUCUCAGA

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J78|1|1S|U|1687
3J78|1|1S|U|1688
3J78|1|1S|A|1689
3J78|1|1S|G|1690
3J78|1|1S|A|1691
3J78|1|1S|G|1692
3J78|1|1S|A|1693
3J78|1|1S|A|1694
3J78|1|1S|G|1695
3J78|1|1S|G|1696
3J78|1|1S|G|1697
3J78|1|1S|G|1698
3J78|1|1S|G|1699
3J78|1|1S|C|1700
3J78|1|1S|A|1701
3J78|1|1S|A|1702
3J78|1|1S|C|1703
3J78|1|1S|U|1704
3J78|1|1S|C|1705
3J78|1|1S|C|1706
3J78|1|1S|A|1707
3J78|1|1S|U|1708
3J78|1|1S|C|1709
3J78|1|1S|U|1710
3J78|1|1S|C|1711
3J78|1|1S|A|1712
3J78|1|1S|G|1713
3J78|1|1S|A|1714

Current chains

Chain 1S

18S ribosomal RNA

Nearby chains

Chain S6

40S ribosomal protein S6