HL_3J79_053
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAUGAAUUUCC
- Length
- 12 nucleotides
- Bulged bases
- 3J79|1|A|U|2883, 3J79|1|A|U|2887, 3J79|1|A|U|2888
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J79|1|A|G|2836
3J79|1|A|G|2837
3J79|1|A|A|2838
3J79|1|A|U|2883
3J79|1|A|G|2884
3J79|1|A|A|2885
3J79|1|A|A|2886
3J79|1|A|U|2887
3J79|1|A|U|2888
3J79|1|A|U|2915
3J79|1|A|C|2916
3J79|1|A|C|2917
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain 1
- 60S ribosomal protein eL27
- Chain 6
- 60S ribosomal protein eL30
- Chain D
- 60S ribosomal protein uL2
- Chain J
- 60S ribosomal protein eL8
- Chain a
- 60S ribosomal protein eL34
- Chain h
- 60S ribosomal protein eL43
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