HL_3J79_057
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41542.1
- Basepair signature
- cWW-R-R-R-R-R
- Number of instances in this motif group
- 30
Unit IDs
3J79|1|A|U|3032
3J79|1|A|A|3033
3J79|1|A|A|3034
3J79|1|A|A|3035
3J79|1|A|A|3036
3J79|1|A|G|3037
3J79|1|A|G|3038
3J79|1|A|G|3039
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain Q
- 60S ribosomal protein uL16
- Chain V
- 60S ribosomal protein eL21
- Chain i
- 60S ribosomal protein eL44
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