HL_3J7P_004

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCGGCG

Length

7 nucleotides

Bulged bases

3J7P|1|5|G|134, 3J7P|1|5|G|135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01413.1

Basepair signature

cWW-cWW

Number of instances in this motif group

1

Unit IDs

3J7P|1|5|C|131
3J7P|1|5|G|132
3J7P|1|5|C|133
3J7P|1|5|G|134
3J7P|1|5|G|135
3J7P|1|5|C|136
3J7P|1|5|G|137

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain N

Ribosomal protein eL15

Chain h

Ribosomal protein uL29

Chain j

Ribosomal protein eL37