3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGCGGCG
Length
7 nucleotides
Bulged bases
3J7P|1|5|G|134, 3J7P|1|5|G|135
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_01413.1
Basepair signature
cWW-cWW
Number of instances in this motif group
1

Unit IDs

3J7P|1|5|C|131
3J7P|1|5|G|132
3J7P|1|5|C|133
3J7P|1|5|G|134
3J7P|1|5|G|135
3J7P|1|5|C|136
3J7P|1|5|G|137

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain N
Ribosomal protein eL15
Chain h
Ribosomal protein uL29
Chain j
Ribosomal protein eL37

Coloring options:

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