HL_3J7P_027

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCAUGGAAGUCGG

Length

13 nucleotides

Bulged bases

3J7P|1|5|A|1983, 3J7P|1|5|A|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73228.1

Basepair signature

cWW-cWW-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

3J7P|1|5|C|1977
3J7P|1|5|C|1978
3J7P|1|5|A|1979
3J7P|1|5|U|1980
3J7P|1|5|G|1981
3J7P|1|5|G|1982
3J7P|1|5|A|1983
3J7P|1|5|A|1984
3J7P|1|5|G|1985
3J7P|1|5|U|1986
3J7P|1|5|C|1987
3J7P|1|5|G|1988
3J7P|1|5|G|1989

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 4

Eukaryotic elongation factor 2

Chain I

Ribosomal protein uL16

Chain K

Ribosomal protein uL11