HL_3J7P_028

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72935.1

Basepair signature

cWW-tSH-R-R-R-R

Number of instances in this motif group

42

Unit IDs

3J7P|1|5|U|2006
3J7P|1|5|G|2007
3J7P|1|5|U|2008
3J7P|1|5|A|2009
3J7P|1|5|A|2010
3J7P|1|5|C|2011
3J7P|1|5|A|2012
3J7P|1|5|A|2013

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 4

Eukaryotic elongation factor 2

Chain K

Ribosomal protein uL11

Chain m

Ribosomal protein eL40

Chain q

Ribosomal protein uL10