HL_3J7P_036

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCCGCGAGGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42245.1

Basepair signature

cWW-R-R-R-R-R-R-R-R-R

Number of instances in this motif group

3

Unit IDs

3J7P|1|5|C|2558
3J7P|1|5|G|2559
3J7P|1|5|C|2560
3J7P|1|5|C|2561
3J7P|1|5|G|2562
3J7P|1|5|C|2563
3J7P|1|5|G|2564
3J7P|1|5|A|2565
3J7P|1|5|G|2566
3J7P|1|5|G|2567
3J7P|1|5|C|2568
3J7P|1|5|G|2569

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

Ribosomal protein eL27