HL_3J7P_049

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

3J7P|1|5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31303.1

Basepair signature

cWW-tSH-R-tHW-R-R

Number of instances in this motif group

6

Unit IDs

3J7P|1|5|G|3757
3J7P|1|5|U|3758
3J7P|1|5|A|3759
3J7P|1|5|A|3760
3J7P|1|5|C|3761
3J7P|1|5|U|3762
3J7P|1|5|A|3763
3J7P|1|5|U|3764
3J7P|1|5|G|3765
3J7P|1|5|A|3766
3J7P|1|5|C|3767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 4

Eukaryotic elongation factor 2

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain Se

Ribosomal protein eS30