HL_3J7P_051

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

3J7P|1|5|A|3876, 3J7P|1|5|A|3877, 3J7P|1|5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90168.1

Basepair signature

cWW-R-R-tWH-R

Number of instances in this motif group

14

Unit IDs

3J7P|1|5|G|3873
3J7P|1|5|G|3874
3J7P|1|5|G|3875
3J7P|1|5|A|3876
3J7P|1|5|A|3877
3J7P|1|5|C|3878
3J7P|1|5|G|3879
3J7P|1|5|G|3880
3J7P|1|5|G|3881
3J7P|1|5|C|3882

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain e

Ribosomal protein eL32