3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
AAGCAGAAU
Length
9 nucleotides
Bulged bases
3J7P|1|5|G|4475
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_72191.1
Basepair signature
cWW-bif-R-R-R-R
Number of instances in this motif group
1

Unit IDs

3J7P|1|5|A|4473
3J7P|1|5|A|4474
3J7P|1|5|G|4475
3J7P|1|5|C|4476
3J7P|1|5|A|4477
3J7P|1|5|G|4478
3J7P|1|5|A|4479
3J7P|1|5|A|4480
3J7P|1|5|U|4481

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 4
Eukaryotic elongation factor 2
Chain H
Ribosomal protein uL6
Chain m
Ribosomal protein eL40

Coloring options:

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