HL_3J7P_079

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUGGUAAUUCUAGA

Length

15 nucleotides

Bulged bases

3J7P|1|S2|U|160, 3J7P|1|S2|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_65557.1

Basepair signature

cWW-R-cWW-R-R-R-R-R-cWH

Number of instances in this motif group

1

Unit IDs

3J7P|1|S2|U|152
3J7P|1|S2|G|153
3J7P|1|S2|U|154
3J7P|1|S2|G|155
3J7P|1|S2|G|156
3J7P|1|S2|U|157
3J7P|1|S2|A|158
3J7P|1|S2|A|159
3J7P|1|S2|U|160
3J7P|1|S2|U|161
3J7P|1|S2|C|162
3J7P|1|S2|U|163
3J7P|1|S2|A|164
3J7P|1|S2|G|165
3J7P|1|S2|A|166

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

Ribosomal protein eS6

Chain SY

Ribosomal protein eS24