3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GCAGCCGC
Length
8 nucleotides
Bulged bases
3J7P|1|S2|G|620
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_72935.1
Basepair signature
cWW-tSH-R-R-R-R
Number of instances in this motif group
42

Unit IDs

3J7P|1|S2|G|617
3J7P|1|S2|C|618
3J7P|1|S2|A|619
3J7P|1|S2|G|620
3J7P|1|S2|C|621
3J7P|1|S2|C|622
3J7P|1|S2|G|623
3J7P|1|S2|C|624

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SX
Ribosomal protein uS12
Chain Se
Ribosomal protein eS30

Coloring options:

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