HL_3J7P_097

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCGUUAUUCCCAUGACC

Length

17 nucleotides

Bulged bases

3J7P|1|S2|C|1116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_14293.1

Basepair signature

cWW-L-R-cWW-R-tSH-tWW-R-cHW-R

Number of instances in this motif group

1

Unit IDs

3J7P|1|S2|G|1108
3J7P|1|S2|C|1109
3J7P|1|S2|G|1110
3J7P|1|S2|U|1111
3J7P|1|S2|U|1112
3J7P|1|S2|A|1113
3J7P|1|S2|U|1114
3J7P|1|S2|U|1115
3J7P|1|S2|C|1116
3J7P|1|S2|C|1117
3J7P|1|S2|C|1118
3J7P|1|S2|A|1119
3J7P|1|S2|U|1120
3J7P|1|S2|G|1121
3J7P|1|S2|A|1122
3J7P|1|S2|C|1123
3J7P|1|S2|C|1124

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SA

Ribosomal protein uS2

Chain SB

Ribosomal protein eS1

Chain SR

Ribosomal protein eS17

Chain Sb

Ribosomal protein eS27