HL_3J7P_106

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30528.1

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

400

Unit IDs

3J7P|1|S2|C|1565
3J7P|1|S2|G|1566
3J7P|1|S2|G|1567
3J7P|1|S2|C|1568
3J7P|1|S2|A|1569
3J7P|1|S2|G|1570

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SS

Ribosomal protein uS13

Chain ST

Ribosomal protein eS19