3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CCAAGCGUUCAUAGCGACG
Length
19 nucleotides
Bulged bases
3J7P|1|5|U|4419
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|C|4412
3J7P|1|5|C|4413
3J7P|1|5|A|4414
3J7P|1|5|A|4415
3J7P|1|5|G|4416
3J7P|1|5|C|4417
3J7P|1|5|G|4418
3J7P|1|5|U|4419
3J7P|1|5|U|4420
3J7P|1|5|C|4421
3J7P|1|5|A|4422
3J7P|1|5|U|4423
3J7P|1|5|A|4424
3J7P|1|5|G|4425
3J7P|1|5|C|4426
3J7P|1|5|G|4427
3J7P|1|5|A|4428
3J7P|1|5|C|4429
3J7P|1|5|G|4430

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 4
Eukaryotic elongation factor 2
Chain H
Ribosomal protein uL6
Chain I
Ribosomal protein uL16
Chain m
Ribosomal protein eL40

Coloring options:

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