HL_3J7P_125

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGCUCCCUCGCU

Length

12 nucleotides

Bulged bases

3J7P|1|5|U|5026, 3J7P|1|5|C|5027

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|5|A|5019
3J7P|1|5|G|5020
3J7P|1|5|C|5021
3J7P|1|5|U|5022
3J7P|1|5|C|5023
3J7P|1|5|C|5024
3J7P|1|5|C|5025
3J7P|1|5|U|5026
3J7P|1|5|C|5027
3J7P|1|5|G|5028
3J7P|1|5|C|5029
3J7P|1|5|U|5030

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain SI

Ribosomal protein eS8

Chain U

Ribosomal protein eL22