HL_3J7P_131

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUCAUAAGCU

Length

11 nucleotides

Bulged bases

3J7P|1|S2|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|S2|G|1657
3J7P|1|S2|G|1658
3J7P|1|S2|U|1659
3J7P|1|S2|C|1660
3J7P|1|S2|A|1661
3J7P|1|S2|U|1662
3J7P|1|S2|A|1663
3J7P|1|S2|A|1664
3J7P|1|S2|G|1665
3J7P|1|S2|C|1666
3J7P|1|S2|U|1667

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

Ribosomal protein uS3

Chain SQ

Ribosomal protein uS9

Chain ST

Ribosomal protein eS19

Chain SU

Ribosomal protein uS10

Chain Sd

Ribosomal protein uS14