HL_3J7Q_001
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 3J7Q|1|5|A|39, 3J7Q|1|5|A|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J7Q_001 not in the Motif Atlas
- Geometric match to HL_4WF9_006
- Geometric discrepancy: 0.2077
- The information below is about HL_4WF9_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30068.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
3J7Q|1|5|U|37
3J7Q|1|5|A|38
3J7Q|1|5|A|39
3J7Q|1|5|G|40
3J7Q|1|5|C|41
3J7Q|1|5|A|42
3J7Q|1|5|U|43
3J7Q|1|5|A|44
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
- Chain N
- Ribosomal protein eL15
- Chain a
- Ribosomal protein uL15
- Chain o
- Ribosomal protein eL42
Coloring options: