HL_3J7Q_017

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

3J7Q|1|5|C|1439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7Q|1|5|C|1436
3J7Q|1|5|C|1437
3J7Q|1|5|U|1438
3J7Q|1|5|C|1439
3J7Q|1|5|U|1440
3J7Q|1|5|C|1441
3J7Q|1|5|C|1442
3J7Q|1|5|A|1443
3J7Q|1|5|G|1444
3J7Q|1|5|U|1445
3J7Q|1|5|C|1446
3J7Q|1|5|C|1447
3J7Q|1|5|G|1448

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain F

Ribosomal protein uL30

Chain Q

Ribosomal protein eL18