HL_3J7Q_054

3D structure

PDB id

3J7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the idle mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGCGCC

Length

7 nucleotides

Bulged bases

3J7Q|1|5|C|4144

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J7Q_054 not in the Motif Atlas

Geometric match to HL_6D12_001

Geometric discrepancy: 0.3485

The information below is about HL_6D12_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.6

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

3J7Q|1|5|G|4139
3J7Q|1|5|C|4140
3J7Q|1|5|G|4141
3J7Q|1|5|C|4142
3J7Q|1|5|G|4143
3J7Q|1|5|C|4144
3J7Q|1|5|C|4145

Current chains

Chain 5

28S ribosomal RNA

Nearby chains