HL_3J7Q_086
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAGUUCUCUUUUC
- Length
- 13 nucleotides
- Bulged bases
- 3J7Q|1|5|U|2631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J7Q_086 not in the Motif Atlas
- Geometric match to HL_5E6M_001
- Geometric discrepancy: 0.3889
- The information below is about HL_5E6M_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99769.3
- Basepair signature
- cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
3J7Q|1|5|G|2622
3J7Q|1|5|A|2623
3J7Q|1|5|G|2624
3J7Q|1|5|U|2625
3J7Q|1|5|U|2626
3J7Q|1|5|C|2627
3J7Q|1|5|U|2628
3J7Q|1|5|C|2629
3J7Q|1|5|U|2630
3J7Q|1|5|U|2631
3J7Q|1|5|U|2632
3J7Q|1|5|U|2633
3J7Q|1|5|C|2634
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain R
- Ribosomal protein eL19
- Chain U
- Ribosomal protein eL22
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