3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUUCACCAG
Length
9 nucleotides
Bulged bases
3J7Y|1|A|U|2864, 3J7Y|1|A|C|2865
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_35996.1
Basepair signature
cWW-cSW-R-R-R
Number of instances in this motif group
1

Unit IDs

3J7Y|1|A|C|2862
3J7Y|1|A|U|2863
3J7Y|1|A|U|2864
3J7Y|1|A|C|2865
3J7Y|1|A|A|2866
3J7Y|1|A|C|2867
3J7Y|1|A|C|2868
3J7Y|1|A|A|2869
3J7Y|1|A|G|2870

Current chains

Chain A
16S rRNA

Nearby chains

Chain 3
bL35
Chain 6
mL38
Chain M
uL15
Chain W
bL27

Coloring options:

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