HL_3J7Z_048

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

3J7Z|1|A|A|1913

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J7Z_048 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1291

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

3J7Z|1|A|G|1910
3J7Z|1|A|U|1911
3J7Z|1|A|A|1912
3J7Z|1|A|A|1913
3J7Z|1|A|C|1914
3J7Z|1|A|U|1915
3J7Z|1|A|A|1916
3J7Z|1|A|U|1917
3J7Z|1|A|A|1918
3J7Z|1|A|A|1919
3J7Z|1|A|C|1920

Current chains

Chain A

23S rRNA

Nearby chains