#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 101-103-78-9
1 HL_8C3A_0498C3A0.107611 LSU rRNAG2231U2232A2233C2235U2236A2237U2238G2239A2240C2241cWWtHW
2 HL_5TBW_0495TBW0.000011 LSU rRNAG2253U2254A2255C2257U2258A2259U2260G2261A2262C2263cWWtHW
3 HL_8VTW_2078VTW0.156711A LSU rRNAG1910PSU1911A1912C19145MU1915A1916PSU1917A1918A1919OMC1920cWWtHWcSH
4 HL_5J7L_1815J7L0.41831DA LSU rRNAG1910PSU1911A1912C19143TD1915A1916PSU1917A1918A1919C1920cWWtHWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
GUAACUAUGAC2
G(PSU)AAC(5MU)A(PSU)AA(OMC)1
GAACAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
UAACUAUGA2
(PSU)AAC(5MU)A(PSU)AA1
(PSU)AAC(3TD)A(PSU)AA1

Release history

Release3.883.893.90
Date2024-09-112024-10-092024-11-06
StatusNew id, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-F-F-tHW-F-F-F-F
    Heat map statistics
    Min 0.11 | Avg 0.21 | Max 0.43
    Help

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